Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm29396-201ENSMUST00000185659 716 ntBASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm18935-201ENSMUST00000212692 664 ntBASIC13.09□□□□□ -0.31
Syne3Q4FZC9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Syne3Q4FZC9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Syne3Q4FZC9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Syne3Q4FZC9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Syne3Q4FZC9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Gm43118-201ENSMUST00000199149 775 ntBASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Syne3Q4FZC9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.07□□□□□ -0.32
Syne3Q4FZC9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Gm35960-201ENSMUST00000202712 767 ntBASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Syne3Q4FZC9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Syne3Q4FZC9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syne3Q4FZC9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syne3Q4FZC9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Syne3Q4FZC9 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.06□□□□□ -0.32
Syne3Q4FZC9 Cog3-203ENSMUST00000227473 4197 ntBASIC13.06□□□□□ -0.32
Syne3Q4FZC9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Syne3Q4FZC9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms