Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc33Q3ULW6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Gm12165-201ENSMUST00000117047 342 ntBASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Gm12015-201ENSMUST00000117065 843 ntBASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Gm12380-201ENSMUST00000119012 544 ntBASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Gm8018-201ENSMUST00000173536 789 ntBASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc33Q3ULW6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm23949-201ENSMUST00000104027 127 ntBASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm28882-201ENSMUST00000185504 314 ntBASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm9540-201ENSMUST00000188230 478 ntBASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm8285-201ENSMUST00000208293 759 ntBASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc33Q3ULW6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc33Q3ULW6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc33Q3ULW6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc33Q3ULW6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc33Q3ULW6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc33Q3ULW6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms