Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 BC001981-202ENSMUST00000191393 1545 ntBASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.07□□□□□ -0.8
Trim63Q38HM4 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.07□□□□□ -0.8
Trim63Q38HM4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.07□□□□□ -0.8
Trim63Q38HM4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.07□□□□□ -0.8
Trim63Q38HM4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim63Q38HM4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 AC154176.2-201ENSMUST00000225376 6429 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm27704-201ENSMUST00000185094 107 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm6089-201ENSMUST00000197666 938 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm26035-201ENSMUST00000083065 308 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms