Protein–RNA interactions for Protein: Q08460

Kcnma1, Calcium-activated potassium channel subunit alpha-1, mousemouse

Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnma1Q08460 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.67□□□□□ -0.22
Kcnma1Q08460 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.67□□□□□ -0.22
Kcnma1Q08460 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Kcnma1Q08460 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.66□□□□□ -0.22
Kcnma1Q08460 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.66□□□□□ -0.22
Kcnma1Q08460 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Gm32999-201ENSMUST00000192693 562 ntBASIC13.66□□□□□ -0.22
Kcnma1Q08460 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Gm45598-202ENSMUST00000210719 986 ntBASIC13.66□□□□□ -0.22
Kcnma1Q08460 Gm18212-201ENSMUST00000211678 889 ntBASIC13.66□□□□□ -0.22
Kcnma1Q08460 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.66□□□□□ -0.22
Kcnma1Q08460 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.66□□□□□ -0.22
Kcnma1Q08460 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Kcnma1Q08460 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.65□□□□□ -0.22
Kcnma1Q08460 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm45186-201ENSMUST00000206874 478 ntBASIC13.65□□□□□ -0.22
Kcnma1Q08460 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.65□□□□□ -0.22
Kcnma1Q08460 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.65□□□□□ -0.22
Kcnma1Q08460 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Kcnma1Q08460 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Kcnma1Q08460 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Kcnma1Q08460 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Kcnma1Q08460 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Kcnma1Q08460 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Kcnma1Q08460 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Kcnma1Q08460 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Kcnma1Q08460 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms