Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Gm8712-201ENSMUST00000221090 701 ntBASIC11.68□□□□□ -0.54
Nkx3-2P97503 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx3-2P97503 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm27046-201ENSMUST00000182160 463 ntBASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm44967-201ENSMUST00000207047 631 ntBASIC11.67□□□□□ -0.54
Nkx3-2P97503 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.67□□□□□ -0.54
Nkx3-2P97503 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.67□□□□□ -0.54
Nkx3-2P97503 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nkx3-2P97503 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm14130-201ENSMUST00000118417 987 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm37466-201ENSMUST00000195692 652 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm45186-201ENSMUST00000206874 478 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm18212-201ENSMUST00000211678 889 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.66□□□□□ -0.54
Nkx3-2P97503 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkx3-2P97503 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms