Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb1P70662 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.25□□□□□ -0.45
Ldb1P70662 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Pck2-205ENSMUST00000226352 2784 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Gm13570-201ENSMUST00000140763 309 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 Gm25043-201ENSMUST00000158604 212 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ldb1P70662 Gm27023-201ENSMUST00000182372 285 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.24□□□□□ -0.45
Ldb1P70662 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ldb1P70662 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ldb1P70662 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.24□□□□□ -0.45
Ldb1P70662 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.24□□□□□ -0.45
Ldb1P70662 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Ldb1P70662 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ldb1P70662 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ldb1P70662 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ldb1P70662 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.24□□□□□ -0.45
Ldb1P70662 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb1P70662 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ldb1P70662 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ldb1P70662 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ldb1P70662 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Gm10434-201ENSMUST00000101158 471 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Gm15370-201ENSMUST00000117158 253 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ldb1P70662 Gm13786-201ENSMUST00000122371 333 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.23□□□□□ -0.45
Ldb1P70662 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Gm44882-201ENSMUST00000205702 802 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Gm10478-201ENSMUST00000084451 396 ntBASIC12.23□□□□□ -0.45
Ldb1P70662 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ldb1P70662 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ldb1P70662 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms