Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm6P62313 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Lsm6P62313 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lsm6P62313 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Lsm6P62313 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm6P62313 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm6P62313 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
Lsm6P62313 AY702102-202ENSMUST00000194651 1173 ntBASIC10.81□□□□□ -0.68
Lsm6P62313 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm6P62313 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.81□□□□□ -0.68
Lsm6P62313 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Gm25857-201ENSMUST00000082788 129 ntBASIC10.81□□□□□ -0.68
Lsm6P62313 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm6P62313 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.81□□□□□ -0.68
Lsm6P62313 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lsm6P62313 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm6P62313 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lsm6P62313 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.8□□□□□ -0.68
Lsm6P62313 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Lsm6P62313 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Lsm6P62313 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Gm24830-201ENSMUST00000102024 166 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Lsm6P62313 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lsm6P62313 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.8□□□□□ -0.68
Lsm6P62313 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Gm38158-201ENSMUST00000194617 339 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 Gm26232-201ENSMUST00000083360 166 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.8□□□□□ -0.68
Lsm6P62313 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lsm6P62313 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm6P62313 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms