Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm15806-201ENSMUST00000120696 955 ntBASIC11.77□□□□□ -0.53
Cdkn2bP55271 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm44405-201ENSMUST00000198952 126 ntBASIC11.77□□□□□ -0.53
Cdkn2bP55271 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.77□□□□□ -0.53
Cdkn2bP55271 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.77□□□□□ -0.53
Cdkn2bP55271 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm10268-201ENSMUST00000085340 555 ntBASIC11.77□□□□□ -0.53
Cdkn2bP55271 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Cog3-203ENSMUST00000227473 4197 ntBASIC11.77□□□□□ -0.53
Cdkn2bP55271 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdkn2bP55271 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm24830-201ENSMUST00000102024 166 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm13736-201ENSMUST00000119272 253 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm12502-201ENSMUST00000120197 444 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm39404-201ENSMUST00000216350 313 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm45925-201ENSMUST00000218882 744 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm26232-201ENSMUST00000083360 166 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.76□□□□□ -0.53
Cdkn2bP55271 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdkn2bP55271 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdkn2bP55271 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms