Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NrlP54846 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NrlP54846 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NrlP54846 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NrlP54846 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NrlP54846 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.12□□□□□ -0.31
NrlP54846 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.12□□□□□ -0.31
NrlP54846 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NrlP54846 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NrlP54846 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NrlP54846 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NrlP54846 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
NrlP54846 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.11□□□□□ -0.31
NrlP54846 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NrlP54846 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NrlP54846 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NrlP54846 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.11□□□□□ -0.31
NrlP54846 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
NrlP54846 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.11□□□□□ -0.31
NrlP54846 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.11□□□□□ -0.31
NrlP54846 Gm18304-201ENSMUST00000189162 546 ntBASIC13.11□□□□□ -0.31
NrlP54846 Gm9555-201ENSMUST00000200908 583 ntBASIC13.11□□□□□ -0.31
NrlP54846 Gm45770-201ENSMUST00000212105 616 ntBASIC13.11□□□□□ -0.31
NrlP54846 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.11□□□□□ -0.31
NrlP54846 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.11□□□□□ -0.31
NrlP54846 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NrlP54846 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.11□□□□□ -0.31
NrlP54846 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NrlP54846 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.1□□□□□ -0.31
NrlP54846 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.1□□□□□ -0.31
NrlP54846 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.1□□□□□ -0.31
NrlP54846 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.1□□□□□ -0.31
NrlP54846 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.1□□□□□ -0.31
NrlP54846 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.1□□□□□ -0.31
NrlP54846 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Ntng1-201ENSMUST00000051253 327 ntBASIC13.1□□□□□ -0.31
NrlP54846 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.1□□□□□ -0.31
NrlP54846 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NrlP54846 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NrlP54846 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.09□□□□□ -0.31
NrlP54846 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.09□□□□□ -0.31
NrlP54846 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.09□□□□□ -0.31
NrlP54846 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.09□□□□□ -0.31
NrlP54846 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
NrlP54846 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.09□□□□□ -0.31
NrlP54846 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NrlP54846 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NrlP54846 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.09□□□□□ -0.31
NrlP54846 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NrlP54846 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms