Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.01□□□□□ -0.33
Shmt1P50431 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.01□□□□□ -0.33
Shmt1P50431 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Shmt1P50431 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.01□□□□□ -0.33
Shmt1P50431 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.01□□□□□ -0.33
Shmt1P50431 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13□□□□□ -0.33
Shmt1P50431 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13□□□□□ -0.33
Shmt1P50431 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13□□□□□ -0.33
Shmt1P50431 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Shmt1P50431 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13□□□□□ -0.33
Shmt1P50431 Gm13296-201ENSMUST00000117854 997 ntBASIC13□□□□□ -0.33
Shmt1P50431 Gm14130-201ENSMUST00000118417 987 ntBASIC13□□□□□ -0.33
Shmt1P50431 Gm13996-201ENSMUST00000118456 430 ntBASIC13□□□□□ -0.33
Shmt1P50431 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Gm14208-201ENSMUST00000119645 678 ntBASIC13□□□□□ -0.33
Shmt1P50431 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13□□□□□ -0.33
Shmt1P50431 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shmt1P50431 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Gm27341-201ENSMUST00000183570 106 ntBASIC13□□□□□ -0.33
Shmt1P50431 Gm9230-201ENSMUST00000188228 532 ntBASIC13□□□□□ -0.33
Shmt1P50431 Gm7003-201ENSMUST00000195089 312 ntBASIC13□□□□□ -0.33
Shmt1P50431 Gm18212-201ENSMUST00000211678 889 ntBASIC13□□□□□ -0.33
Shmt1P50431 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13□□□□□ -0.33
Shmt1P50431 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Shmt1P50431 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shmt1P50431 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13□□□□□ -0.33
Shmt1P50431 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Shmt1P50431 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shmt1P50431 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Shmt1P50431 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Shmt1P50431 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Shmt1P50431 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Shmt1P50431 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.99□□□□□ -0.33
Shmt1P50431 Rprl1-201ENSMUST00000158050 327 ntBASIC12.99□□□□□ -0.33
Shmt1P50431 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.99□□□□□ -0.33
Shmt1P50431 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.99□□□□□ -0.33
Shmt1P50431 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shmt1P50431 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms