Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
SftpbP50405 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SftpbP50405 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.58□□□□□ -0.4
SftpbP50405 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.58□□□□□ -0.4
SftpbP50405 Gm13492-201ENSMUST00000119772 665 ntBASIC12.58□□□□□ -0.4
SftpbP50405 Gm11597-201ENSMUST00000121423 964 ntBASIC12.58□□□□□ -0.4
SftpbP50405 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.58□□□□□ -0.4
SftpbP50405 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.58□□□□□ -0.4
SftpbP50405 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.58□□□□□ -0.4
SftpbP50405 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.58□□□□□ -0.4
SftpbP50405 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.58□□□□□ -0.4
SftpbP50405 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.58□□□□□ -0.4
SftpbP50405 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SftpbP50405 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SftpbP50405 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
SftpbP50405 Gm12502-201ENSMUST00000120197 444 ntBASIC12.57□□□□□ -0.4
SftpbP50405 Gm27243-201ENSMUST00000183964 521 ntBASIC12.57□□□□□ -0.4
SftpbP50405 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.57□□□□□ -0.4
SftpbP50405 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.57□□□□□ -0.4
SftpbP50405 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.57□□□□□ -0.4
SftpbP50405 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SftpbP50405 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SftpbP50405 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SftpbP50405 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SftpbP50405 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SftpbP50405 Gm16177-201ENSMUST00000120728 718 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Gm1335-201ENSMUST00000121653 386 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Gm26927-201ENSMUST00000182385 965 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Gm27682-201ENSMUST00000183930 110 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Gm42599-201ENSMUST00000201308 469 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.56□□□□□ -0.4
SftpbP50405 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.56□□□□□ -0.4
SftpbP50405 Gm24136-201ENSMUST00000083374 165 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SftpbP50405 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms