Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm14704-201ENSMUST00000120300 874 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm23363-201ENSMUST00000175024 79 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm2423-201ENSMUST00000074863 733 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.19□□□□□ -0.78
Nkx2-1P50220 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx2-1P50220 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx2-1P50220 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.18□□□□□ -0.78
Nkx2-1P50220 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.18□□□□□ -0.78
Nkx2-1P50220 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Gm45668-201ENSMUST00000211271 493 ntBASIC10.18□□□□□ -0.78
Nkx2-1P50220 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.18□□□□□ -0.78
Nkx2-1P50220 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx2-1P50220 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms