Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Sox18P43680 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox18P43680 Mir874-201ENSMUST00000104769 76 ntBASIC11.97□□□□□ -0.49
Sox18P43680 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox18P43680 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.97□□□□□ -0.49
Sox18P43680 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Sox18P43680 AC118006.2-201ENSMUST00000224167 962 ntBASIC11.97□□□□□ -0.49
Sox18P43680 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.97□□□□□ -0.49
Sox18P43680 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sox18P43680 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Sox18P43680 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Sox18P43680 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Mir669o-201ENSMUST00000103898 96 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox18P43680 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.96□□□□□ -0.49
Sox18P43680 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox18P43680 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Gm28882-201ENSMUST00000185504 314 ntBASIC11.96□□□□□ -0.49
Sox18P43680 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox18P43680 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.96□□□□□ -0.49
Sox18P43680 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Gm34023-201ENSMUST00000195539 217 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.96□□□□□ -0.49
Sox18P43680 Gm6681-201ENSMUST00000205215 607 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Gm9463-201ENSMUST00000206707 601 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC11.96□□□□□ -0.49
Sox18P43680 AC154730.1-201ENSMUST00000227874 816 ntBASIC11.96□□□□□ -0.49
Sox18P43680 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.96□□□□□ -0.49
Sox18P43680 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Gm21811-201ENSMUST00000096485 930 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox18P43680 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.96□□□□□ -0.49
Sox18P43680 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.96□□□□□ -0.5
Sox18P43680 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.96□□□□□ -0.5
Sox18P43680 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Sox18P43680 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
Sox18P43680 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox18P43680 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.96□□□□□ -0.5
Sox18P43680 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms