Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk2P38575 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.78□□□□□ -0.68
Upk2P38575 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.78□□□□□ -0.68
Upk2P38575 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Gm17420-201ENSMUST00000164753 153 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.78□□□□□ -0.68
Upk2P38575 Gm27572-201ENSMUST00000183702 255 ntBASIC10.78□□□□□ -0.68
Upk2P38575 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.78□□□□□ -0.68
Upk2P38575 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.78□□□□□ -0.68
Upk2P38575 Gm35960-201ENSMUST00000202712 767 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.78□□□□□ -0.68
Upk2P38575 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Gm9823-201ENSMUST00000051212 327 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.78□□□□□ -0.68
Upk2P38575 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk2P38575 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Upk2P38575 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Upk2P38575 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk2P38575 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.78□□□□□ -0.68
Upk2P38575 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Upk2P38575 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.78□□□□□ -0.68
Upk2P38575 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk2P38575 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk2P38575 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk2P38575 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.77□□□□□ -0.68
Upk2P38575 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Upk2P38575 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.77□□□□□ -0.68
Upk2P38575 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Upk2P38575 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Upk2P38575 Gm11531-201ENSMUST00000117614 555 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Gm4986-201ENSMUST00000119731 549 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.77□□□□□ -0.69
Upk2P38575 Gm13297-201ENSMUST00000120205 934 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Upk2P38575 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.77□□□□□ -0.69
Upk2P38575 Gm29396-201ENSMUST00000185659 716 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Gm37489-201ENSMUST00000191883 159 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.77□□□□□ -0.69
Upk2P38575 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Upk2P38575 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Gm10608-202ENSMUST00000213924 676 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.77□□□□□ -0.69
Upk2P38575 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Upk2P38575 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Upk2P38575 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.77□□□□□ -0.69
Upk2P38575 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk2P38575 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.76□□□□□ -0.69
Upk2P38575 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.76□□□□□ -0.69
Upk2P38575 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Upk2P38575 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Upk2P38575 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms