Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm5523-201ENSMUST00000180415 997 ntBASIC13.15□□□□□ -0.3
Mmp3P28862 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Gm27530-201ENSMUST00000184096 98 ntBASIC13.15□□□□□ -0.3
Mmp3P28862 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.15□□□□□ -0.3
Mmp3P28862 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.15□□□□□ -0.3
Mmp3P28862 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.15□□□□□ -0.3
Mmp3P28862 Gm4157-201ENSMUST00000211647 679 ntBASIC13.15□□□□□ -0.3
Mmp3P28862 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Gm807-202ENSMUST00000224929 408 ntBASIC13.15□□□□□ -0.3
Mmp3P28862 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Mmp3P28862 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.15□□□□□ -0.3
Mmp3P28862 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Mmp3P28862 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp3P28862 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.15□□□□□ -0.3
Mmp3P28862 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp3P28862 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 Gm26286-201ENSMUST00000104166 134 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.14□□□□□ -0.31
Mmp3P28862 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Gm11509-201ENSMUST00000117358 325 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 Gm13045-201ENSMUST00000119019 712 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.14□□□□□ -0.31
Mmp3P28862 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Gm19353-201ENSMUST00000184561 445 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 Gm3332-201ENSMUST00000189337 928 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Mmp3P28862 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.14□□□□□ -0.31
Mmp3P28862 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Mmp3P28862 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.14□□□□□ -0.31
Mmp3P28862 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.14□□□□□ -0.31
Mmp3P28862 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Mmp3P28862 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.14□□□□□ -0.31
Mmp3P28862 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp3P28862 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Mmp3P28862 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Mmp3P28862 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Mmp3P28862 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Mmp3P28862 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Gm11511-201ENSMUST00000118146 540 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Gm11941-201ENSMUST00000119904 610 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Gm14247-201ENSMUST00000120950 237 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.13□□□□□ -0.31
Mmp3P28862 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.13□□□□□ -0.31
Mmp3P28862 Gm8343-201ENSMUST00000182705 994 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.13□□□□□ -0.31
Mmp3P28862 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Mmp3P28862 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.13□□□□□ -0.31
Mmp3P28862 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp3P28862 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms