Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm9230-201ENSMUST00000188228 532 ntBASIC14.25□□□□□ -0.13
Pde6aP27664 Gm19187-201ENSMUST00000206781 892 ntBASIC14.25□□□□□ -0.13
Pde6aP27664 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pde6aP27664 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6aP27664 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pde6aP27664 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.25□□□□□ -0.13
Pde6aP27664 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pde6aP27664 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm23912-201ENSMUST00000104687 87 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pde6aP27664 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm25890-201ENSMUST00000177643 165 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Gm22614-201ENSMUST00000178300 165 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm18711-201ENSMUST00000199341 750 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.24□□□□□ -0.13
Pde6aP27664 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm22042-201ENSMUST00000082989 165 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Gm26110-201ENSMUST00000083971 165 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.24□□□□□ -0.13
Pde6aP27664 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6aP27664 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Gm11989-201ENSMUST00000117240 672 ntBASIC14.23□□□□□ -0.13
Pde6aP27664 Gm11362-201ENSMUST00000118838 850 ntBASIC14.23□□□□□ -0.13
Pde6aP27664 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Gm14247-201ENSMUST00000120950 237 ntBASIC14.23□□□□□ -0.13
Pde6aP27664 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Gm25700-201ENSMUST00000177693 110 ntBASIC14.23□□□□□ -0.13
Pde6aP27664 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Rprl1-202ENSMUST00000198476 238 ntBASIC14.23□□□□□ -0.13
Pde6aP27664 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Gm45598-202ENSMUST00000210719 986 ntBASIC14.23□□□□□ -0.13
Pde6aP27664 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pde6aP27664 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms