Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm11246-201ENSMUST00000120880 345 ntBASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm8194-201ENSMUST00000159783 859 ntBASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm2517-201ENSMUST00000215651 348 ntBASIC15.86■□□□□ 0.13
Hoxc9P09633 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.86■□□□□ 0.13
Hoxc9P09633 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.85■□□□□ 0.13
Hoxc9P09633 Gm11949-201ENSMUST00000117640 372 ntBASIC15.85■□□□□ 0.13
Hoxc9P09633 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.85■□□□□ 0.13
Hoxc9P09633 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.85■□□□□ 0.13
Hoxc9P09633 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.85■□□□□ 0.13
Hoxc9P09633 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.85■□□□□ 0.13
Hoxc9P09633 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Hoxc9P09633 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc9P09633 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hoxc9P09633 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
Hoxc9P09633 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Hoxc9P09633 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Hoxc9P09633 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm22920-201ENSMUST00000102175 109 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm22138-201ENSMUST00000158748 128 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm23771-201ENSMUST00000178702 110 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm37299-201ENSMUST00000193951 826 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm17931-201ENSMUST00000208132 634 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.84■□□□□ 0.13
Hoxc9P09633 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hoxc9P09633 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.84■□□□□ 0.13
Hoxc9P09633 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc9P09633 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc9P09633 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc9P09633 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Hoxc9P09633 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc9P09633 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.83■□□□□ 0.13
Hoxc9P09633 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Hoxc9P09633 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc9P09633 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms