Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC18.26■□□□□ 0.51
NclP09405 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NclP09405 Gm10305-201ENSMUST00000195331 2475 ntBASIC18.26■□□□□ 0.51
NclP09405 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Gm12380-201ENSMUST00000119012 544 ntBASIC18.26■□□□□ 0.51
NclP09405 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Gm28071-201ENSMUST00000190355 478 ntBASIC18.26■□□□□ 0.51
NclP09405 AC153974.2-201ENSMUST00000218577 1025 ntBASIC18.26■□□□□ 0.51
NclP09405 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NclP09405 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC18.26■□□□□ 0.51
NclP09405 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC18.26■□□□□ 0.51
NclP09405 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NclP09405 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NclP09405 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NclP09405 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC18.25■□□□□ 0.51
NclP09405 Mir3547-201ENSMUST00000175461 88 ntBASIC18.25■□□□□ 0.51
NclP09405 Dhrs4-202ENSMUST00000226168 828 ntBASIC18.25■□□□□ 0.51
NclP09405 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NclP09405 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NclP09405 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
NclP09405 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NclP09405 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NclP09405 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NclP09405 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
NclP09405 Gm15711-201ENSMUST00000118889 535 ntBASIC18.24■□□□□ 0.51
NclP09405 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC18.24■□□□□ 0.51
NclP09405 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC18.24■□□□□ 0.51
NclP09405 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NclP09405 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NclP09405 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC18.23■□□□□ 0.51
NclP09405 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.23■□□□□ 0.51
NclP09405 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NclP09405 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC18.23■□□□□ 0.51
NclP09405 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC18.23■□□□□ 0.51
NclP09405 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC18.23■□□□□ 0.51
NclP09405 AU022133-201ENSMUST00000200601 873 ntBASIC18.23■□□□□ 0.51
NclP09405 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NclP09405 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NclP09405 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC18.22■□□□□ 0.51
NclP09405 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC18.22■□□□□ 0.51
NclP09405 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms