Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm13315-201ENSMUST00000120376 991 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm13570-201ENSMUST00000140763 309 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm24845-201ENSMUST00000158034 109 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Hoxa3P02831 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm39404-201ENSMUST00000216350 313 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.35□□□□□ -0.75
Hoxa3P02831 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.35□□□□□ -0.75
Hoxa3P02831 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Hoxa3P02831 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm11597-201ENSMUST00000121423 964 ntBASIC10.34□□□□□ -0.75
Hoxa3P02831 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.34□□□□□ -0.75
Hoxa3P02831 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.34□□□□□ -0.75
Hoxa3P02831 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.34□□□□□ -0.75
Hoxa3P02831 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.34□□□□□ -0.75
Hoxa3P02831 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms