Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shoc2O88520 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shoc2O88520 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shoc2O88520 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Gm13786-201ENSMUST00000122371 333 ntBASIC12.71□□□□□ -0.37
Shoc2O88520 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.71□□□□□ -0.37
Shoc2O88520 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.71□□□□□ -0.37
Shoc2O88520 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Shoc2O88520 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
Shoc2O88520 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.71□□□□□ -0.37
Shoc2O88520 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.71□□□□□ -0.37
Shoc2O88520 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.71□□□□□ -0.37
Shoc2O88520 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.71□□□□□ -0.37
Shoc2O88520 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shoc2O88520 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shoc2O88520 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Shoc2O88520 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.71□□□□□ -0.38
Shoc2O88520 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Rubie-203ENSMUST00000227803 2430 ntBASIC12.71□□□□□ -0.38
Shoc2O88520 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shoc2O88520 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.71□□□□□ -0.38
Shoc2O88520 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.7□□□□□ -0.38
Shoc2O88520 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.7□□□□□ -0.38
Shoc2O88520 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.7□□□□□ -0.38
Shoc2O88520 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.7□□□□□ -0.38
Shoc2O88520 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.7□□□□□ -0.38
Shoc2O88520 Gm8018-201ENSMUST00000173536 789 ntBASIC12.7□□□□□ -0.38
Shoc2O88520 Gm27243-201ENSMUST00000183964 521 ntBASIC12.7□□□□□ -0.38
Shoc2O88520 Gm37489-201ENSMUST00000191883 159 ntBASIC12.7□□□□□ -0.38
Shoc2O88520 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.7□□□□□ -0.38
Shoc2O88520 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.7□□□□□ -0.38
Shoc2O88520 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Shoc2O88520 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shoc2O88520 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms