Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ttc3O88196 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.81□□□□□ -0.36
Ttc3O88196 Gm23251-201ENSMUST00000103773 110 ntBASIC12.81□□□□□ -0.36
Ttc3O88196 Gm12579-201ENSMUST00000118040 783 ntBASIC12.81□□□□□ -0.36
Ttc3O88196 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Ttc3O88196 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ttc3O88196 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ttc3O88196 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ttc3O88196 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ttc3O88196 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 Gm8956-201ENSMUST00000203939 825 ntBASIC12.81□□□□□ -0.36
Ttc3O88196 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.81□□□□□ -0.36
Ttc3O88196 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.81□□□□□ -0.36
Ttc3O88196 Gm26448-201ENSMUST00000082446 203 ntBASIC12.81□□□□□ -0.36
Ttc3O88196 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.81□□□□□ -0.36
Ttc3O88196 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.81□□□□□ -0.36
Ttc3O88196 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.81□□□□□ -0.36
Ttc3O88196 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ttc3O88196 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ttc3O88196 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ttc3O88196 Gm8566-201ENSMUST00000120174 465 ntBASIC12.8□□□□□ -0.36
Ttc3O88196 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.8□□□□□ -0.36
Ttc3O88196 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.8□□□□□ -0.36
Ttc3O88196 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.8□□□□□ -0.36
Ttc3O88196 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.8□□□□□ -0.36
Ttc3O88196 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.8□□□□□ -0.36
Ttc3O88196 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ttc3O88196 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.8□□□□□ -0.36
Ttc3O88196 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.8□□□□□ -0.36
Ttc3O88196 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.8□□□□□ -0.36
Ttc3O88196 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.8□□□□□ -0.36
Ttc3O88196 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.8□□□□□ -0.36
Ttc3O88196 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.8□□□□□ -0.36
Ttc3O88196 Gm43184-201ENSMUST00000197247 542 ntBASIC12.8□□□□□ -0.36
Ttc3O88196 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.8□□□□□ -0.36
Ttc3O88196 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ttc3O88196 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc3O88196 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc3O88196 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc3O88196 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ttc3O88196 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc3O88196 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc3O88196 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc3O88196 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ttc3O88196 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 174.1 ms