Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Itgb3O54890 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.04□□□□□ -0.32
Itgb3O54890 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm14208-201ENSMUST00000119645 678 ntBASIC13.04□□□□□ -0.32
Itgb3O54890 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.04□□□□□ -0.32
Itgb3O54890 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.04□□□□□ -0.32
Itgb3O54890 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm17812-201ENSMUST00000204935 318 ntBASIC13.04□□□□□ -0.32
Itgb3O54890 Gm44882-201ENSMUST00000205702 802 ntBASIC13.04□□□□□ -0.32
Itgb3O54890 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.04□□□□□ -0.32
Itgb3O54890 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Itgb3O54890 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm8385-201ENSMUST00000058999 643 ntBASIC13.04□□□□□ -0.32
Itgb3O54890 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.04□□□□□ -0.32
Itgb3O54890 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.04□□□□□ -0.32
Itgb3O54890 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Itgb3O54890 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Itgb3O54890 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Itgb3O54890 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm11439-201ENSMUST00000118598 409 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Gm14277-201ENSMUST00000121195 360 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm27341-201ENSMUST00000183570 106 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm45433-201ENSMUST00000209386 247 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Gm5363-201ENSMUST00000211927 938 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Itgb3O54890 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Itgb3O54890 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.03□□□□□ -0.32
Itgb3O54890 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Itgb3O54890 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Itgb3O54890 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.03□□□□□ -0.32
Itgb3O54890 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.03□□□□□ -0.32
Itgb3O54890 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Itgb3O54890 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Itgb3O54890 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Itgb3O54890 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Itgb3O54890 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Itgb3O54890 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms