Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MSH5O43196 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
MSH5O43196 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.75■■□□□ 1.07
MSH5O43196 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC21.75■■□□□ 1.07
MSH5O43196 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC21.75■■□□□ 1.07
MSH5O43196 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC21.75■■□□□ 1.07
MSH5O43196 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 LINC01021-203ENST00000510165 1106 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.75■■□□□ 1.07
MSH5O43196 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC21.75■■□□□ 1.07
MSH5O43196 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MSH5O43196 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
MSH5O43196 CCDC58P5-201ENST00000536923 432 ntBASIC21.75■■□□□ 1.07
MSH5O43196 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 KRT8P23-201ENST00000560090 1207 ntBASIC21.75■■□□□ 1.07
MSH5O43196 LINC01225-203ENST00000563550 1244 ntBASIC21.75■■□□□ 1.07
MSH5O43196 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.75■■□□□ 1.07
MSH5O43196 AC009118.2-201ENST00000613275 655 ntBASIC21.75■■□□□ 1.07
MSH5O43196 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSH5O43196 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.75■■□□□ 1.07
MSH5O43196 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 AC046185.3-201ENST00000623228 1824 ntBASIC21.74■■□□□ 1.07
MSH5O43196 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.74■■□□□ 1.07
MSH5O43196 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.74■■□□□ 1.07
MSH5O43196 AL512635.1-201ENST00000414056 832 ntBASIC21.74■■□□□ 1.07
MSH5O43196 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 MTCYBP31-201ENST00000438855 1122 ntBASIC21.74■■□□□ 1.07
MSH5O43196 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.74■■□□□ 1.07
MSH5O43196 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MSH5O43196 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.74■■□□□ 1.07
MSH5O43196 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.74■■□□□ 1.07
MSH5O43196 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 MIR4515-201ENST00000584082 81 ntBASIC21.74■■□□□ 1.07
MSH5O43196 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.74■■□□□ 1.07
MSH5O43196 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC21.74■■□□□ 1.07
MSH5O43196 AC006249.1-201ENST00000621223 471 ntBASIC21.74■■□□□ 1.07
MSH5O43196 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC21.74■■□□□ 1.07
MSH5O43196 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSH5O43196 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.73■■□□□ 1.07
MSH5O43196 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 AL135999.2-201ENST00000622438 1686 ntBASIC21.73■■□□□ 1.07
MSH5O43196 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MSH5O43196 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 DUSP19-201ENST00000342619 1117 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MSH5O43196 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 OFD1P11Y-201ENST00000418213 1177 ntBASIC21.73■■□□□ 1.07
MSH5O43196 ARSEP1-201ENST00000420443 635 ntBASIC21.73■■□□□ 1.07
MSH5O43196 HAUS1P2-201ENST00000439908 784 ntBASIC21.73■■□□□ 1.07
MSH5O43196 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
MSH5O43196 RPL34P26-201ENST00000445636 354 ntBASIC21.73■■□□□ 1.07
MSH5O43196 MTND5P8-201ENST00000449817 1083 ntBASIC21.73■■□□□ 1.07
MSH5O43196 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.73■■□□□ 1.07
MSH5O43196 AC004890.2-204ENST00000481968 304 ntBASIC21.73■■□□□ 1.07
MSH5O43196 RPL37AP8-201ENST00000494116 276 ntBASIC21.73■■□□□ 1.07
MSH5O43196 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
MSH5O43196 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC21.73■■□□□ 1.07
MSH5O43196 TRIQK-220ENST00000524037 865 ntTSL 2 BASIC21.73■■□□□ 1.07
MSH5O43196 AC027369.6-201ENST00000525520 931 ntBASIC21.73■■□□□ 1.07
MSH5O43196 MTND5P21-201ENST00000531961 522 ntBASIC21.73■■□□□ 1.07
MSH5O43196 ALG1L8P-201ENST00000533887 760 ntBASIC21.73■■□□□ 1.07
MSH5O43196 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSH5O43196 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.73■■□□□ 1.07
MSH5O43196 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.73■■□□□ 1.07
MSH5O43196 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC21.73■■□□□ 1.07
MSH5O43196 AC009088.1-201ENST00000565152 833 ntBASIC21.73■■□□□ 1.07
MSH5O43196 MIR4453-201ENST00000584019 89 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms