Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.82□□□□□ -0.36
Ebf3O08791 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.82□□□□□ -0.36
Ebf3O08791 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.82□□□□□ -0.36
Ebf3O08791 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ebf3O08791 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ebf3O08791 Gm13315-201ENSMUST00000120376 991 ntBASIC12.82□□□□□ -0.36
Ebf3O08791 Gm13813-201ENSMUST00000120998 787 ntBASIC12.82□□□□□ -0.36
Ebf3O08791 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Gm22334-201ENSMUST00000158070 133 ntBASIC12.82□□□□□ -0.36
Ebf3O08791 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Ebf3O08791 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Gm8959-201ENSMUST00000213150 571 ntBASIC12.82□□□□□ -0.36
Ebf3O08791 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.82□□□□□ -0.36
Ebf3O08791 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Gm10076-201ENSMUST00000073238 384 ntBASIC12.82□□□□□ -0.36
Ebf3O08791 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ebf3O08791 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.81□□□□□ -0.36
Ebf3O08791 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ebf3O08791 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Gm20426-201ENSMUST00000173657 440 ntBASIC12.81□□□□□ -0.36
Ebf3O08791 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.81□□□□□ -0.36
Ebf3O08791 Gm32999-201ENSMUST00000192693 562 ntBASIC12.81□□□□□ -0.36
Ebf3O08791 Gm17812-201ENSMUST00000204935 318 ntBASIC12.81□□□□□ -0.36
Ebf3O08791 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.81□□□□□ -0.36
Ebf3O08791 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.81□□□□□ -0.36
Ebf3O08791 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ebf3O08791 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ebf3O08791 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.8□□□□□ -0.36
Ebf3O08791 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.8□□□□□ -0.36
Ebf3O08791 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.8□□□□□ -0.36
Ebf3O08791 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.8□□□□□ -0.36
Ebf3O08791 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ebf3O08791 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ebf3O08791 Gm12015-201ENSMUST00000117065 843 ntBASIC12.8□□□□□ -0.36
Ebf3O08791 Gm11597-201ENSMUST00000121423 964 ntBASIC12.8□□□□□ -0.36
Ebf3O08791 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ebf3O08791 Gm24514-201ENSMUST00000174961 285 ntBASIC12.8□□□□□ -0.36
Ebf3O08791 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ebf3O08791 Gm27552-201ENSMUST00000183351 62 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms