Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh17E9PXF0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Gm6963-201ENSMUST00000147879 379 ntBASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Mir5120-201ENSMUST00000175020 78 ntBASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Nsd1-205ENSMUST00000224693 852 ntBASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Gm8385-201ENSMUST00000058999 643 ntBASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh17E9PXF0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm12015-201ENSMUST00000117065 843 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm5070-201ENSMUST00000177599 862 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Mir6927-201ENSMUST00000184494 71 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm8913-201ENSMUST00000209491 641 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh17E9PXF0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms