Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Gm9908-201ENSMUST00000211534 448 ntBASIC9.49□□□□□ -0.89
PdfS4R2K0 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.49□□□□□ -0.89
PdfS4R2K0 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.49□□□□□ -0.89
PdfS4R2K0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
PdfS4R2K0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PdfS4R2K0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.48□□□□□ -0.89
PdfS4R2K0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gm28911-201ENSMUST00000188837 117 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gm18187-201ENSMUST00000196476 984 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.48□□□□□ -0.89
PdfS4R2K0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.48□□□□□ -0.89
PdfS4R2K0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PdfS4R2K0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
PdfS4R2K0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
PdfS4R2K0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms