Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.8□□□□□ -0.2
AmfrQ9R049 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.8□□□□□ -0.2
AmfrQ9R049 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AmfrQ9R049 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.79□□□□□ -0.2
AmfrQ9R049 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.79□□□□□ -0.2
AmfrQ9R049 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.79□□□□□ -0.2
AmfrQ9R049 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Gm3961-201ENSMUST00000204425 994 ntBASIC13.79□□□□□ -0.2
AmfrQ9R049 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Morn2-202ENSMUST00000227729 656 ntBASIC13.79□□□□□ -0.2
AmfrQ9R049 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AmfrQ9R049 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AmfrQ9R049 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
AmfrQ9R049 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm12241-201ENSMUST00000118330 726 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm4986-201ENSMUST00000119731 549 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm13492-201ENSMUST00000119772 665 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.78□□□□□ -0.2
AmfrQ9R049 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm38266-201ENSMUST00000194931 421 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm21769-201ENSMUST00000211922 111 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm10608-202ENSMUST00000213924 676 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
AmfrQ9R049 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AmfrQ9R049 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
AmfrQ9R049 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.78□□□□□ -0.2
AmfrQ9R049 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.78□□□□□ -0.2
AmfrQ9R049 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AmfrQ9R049 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
AmfrQ9R049 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.78□□□□□ -0.2
AmfrQ9R049 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AmfrQ9R049 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
AmfrQ9R049 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
AmfrQ9R049 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
AmfrQ9R049 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
AmfrQ9R049 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AmfrQ9R049 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AmfrQ9R049 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
AmfrQ9R049 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
AmfrQ9R049 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AmfrQ9R049 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AmfrQ9R049 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AmfrQ9R049 Gm15370-201ENSMUST00000117158 253 ntBASIC13.77□□□□□ -0.21
AmfrQ9R049 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AmfrQ9R049 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AmfrQ9R049 Gm15703-201ENSMUST00000120250 880 ntBASIC13.77□□□□□ -0.21
AmfrQ9R049 Gm13342-201ENSMUST00000121055 207 ntBASIC13.77□□□□□ -0.21
AmfrQ9R049 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms