Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl54Q9CPW3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gm14704-201ENSMUST00000120300 874 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gm23363-201ENSMUST00000175024 79 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gm5279-201ENSMUST00000199575 745 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gm8099-201ENSMUST00000200510 742 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl54Q9CPW3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Mrpl54Q9CPW3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Mrpl54Q9CPW3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Mrpl54Q9CPW3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Mrpl54Q9CPW3 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Mrpl54Q9CPW3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms