Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm11509-201ENSMUST00000117358 325 ntBASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm43916-201ENSMUST00000205062 967 ntBASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm18041-201ENSMUST00000218210 618 ntBASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim34aQ99PP6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.17■□□□□ 0.02
Trim34aQ99PP6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim34aQ99PP6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Gm27438-201ENSMUST00000183480 110 ntBASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.15■□□□□ 0.02
Trim34aQ99PP6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim34aQ99PP6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trim34aQ99PP6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim34aQ99PP6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms