Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim8Q99PJ2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm15703-201ENSMUST00000120250 880 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm15806-201ENSMUST00000120696 955 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm8602-201ENSMUST00000184045 607 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm8099-201ENSMUST00000200510 742 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim8Q99PJ2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm24231-201ENSMUST00000104315 133 ntBASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm43433-201ENSMUST00000196573 481 ntBASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm5035-201ENSMUST00000215581 927 ntBASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim8Q99PJ2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms