Protein–RNA interactions for Protein: Q99MW3

Pramel1, Preferentially expressed antigen in melanoma-like protein 1, mousemouse

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramel1Q99MW3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pramel1Q99MW3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Gm12857-201ENSMUST00000117678 592 ntBASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Gm11511-201ENSMUST00000118146 540 ntBASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Gm15881-201ENSMUST00000148792 942 ntBASIC13.01□□□□□ -0.33
Pramel1Q99MW3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Gm10774-201ENSMUST00000188689 204 ntBASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pramel1Q99MW3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Gm38355-201ENSMUST00000192514 1570 ntBASIC13□□□□□ -0.33
Pramel1Q99MW3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13□□□□□ -0.33
Pramel1Q99MW3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Gm11628-201ENSMUST00000117568 171 ntBASIC13□□□□□ -0.33
Pramel1Q99MW3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Gm14460-201ENSMUST00000121511 639 ntBASIC13□□□□□ -0.33
Pramel1Q99MW3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Gm18041-201ENSMUST00000218210 618 ntBASIC13□□□□□ -0.33
Pramel1Q99MW3 AC122408.1-201ENSMUST00000218949 218 ntBASIC13□□□□□ -0.33
Pramel1Q99MW3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Gm10288-201ENSMUST00000084614 537 ntBASIC13□□□□□ -0.33
Pramel1Q99MW3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pramel1Q99MW3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pramel1Q99MW3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pramel1Q99MW3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pramel1Q99MW3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pramel1Q99MW3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pramel1Q99MW3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pramel1Q99MW3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms