Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.83□□□□□ -0.36
TrabdQ99JY4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Gm14208-201ENSMUST00000119645 678 ntBASIC12.82□□□□□ -0.36
TrabdQ99JY4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Gm28450-201ENSMUST00000187349 638 ntBASIC12.82□□□□□ -0.36
TrabdQ99JY4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.82□□□□□ -0.36
TrabdQ99JY4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.82□□□□□ -0.36
TrabdQ99JY4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.82□□□□□ -0.36
TrabdQ99JY4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
TrabdQ99JY4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gm12266-201ENSMUST00000120311 962 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Mir5132-201ENSMUST00000175166 71 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gm28071-201ENSMUST00000190355 478 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gm18711-201ENSMUST00000199341 750 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.81□□□□□ -0.36
TrabdQ99JY4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TrabdQ99JY4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms