Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.2□□□□□ -0.14
Rfc4Q99J62 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc4Q99J62 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.19□□□□□ -0.14
Rfc4Q99J62 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.19□□□□□ -0.14
Rfc4Q99J62 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.19□□□□□ -0.14
Rfc4Q99J62 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm9540-201ENSMUST00000188230 478 ntBASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm45550-201ENSMUST00000209380 946 ntBASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.19□□□□□ -0.14
Rfc4Q99J62 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfc4Q99J62 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gm15881-201ENSMUST00000148792 942 ntBASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gm8365-201ENSMUST00000197334 648 ntBASIC14.18□□□□□ -0.14
Rfc4Q99J62 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.18□□□□□ -0.14
Rfc4Q99J62 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gm7600-201ENSMUST00000209657 785 ntBASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gm10752-201ENSMUST00000218348 729 ntBASIC14.18□□□□□ -0.14
Rfc4Q99J62 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.18□□□□□ -0.14
Rfc4Q99J62 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc4Q99J62 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.17□□□□□ -0.14
Rfc4Q99J62 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Rfc4Q99J62 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms