Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm7395-201ENSMUST00000216059 1045 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC19.19■□□□□ 0.66
Clip1Q922J3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 AC129219.2-201ENSMUST00000224324 701 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Gm11663-201ENSMUST00000117888 290 ntBASIC19.18■□□□□ 0.66
Clip1Q922J3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Gm45550-201ENSMUST00000209380 946 ntBASIC19.18■□□□□ 0.66
Clip1Q922J3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Clip1Q922J3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Clip1Q922J3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip1Q922J3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clip1Q922J3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Gm45575-201ENSMUST00000210283 548 ntBASIC19.17■□□□□ 0.66
Clip1Q922J3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC19.17■□□□□ 0.66
Clip1Q922J3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clip1Q922J3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Clip1Q922J3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Clip1Q922J3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC19.16■□□□□ 0.66
Clip1Q922J3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC19.16■□□□□ 0.66
Clip1Q922J3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC19.16■□□□□ 0.66
Clip1Q922J3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Clip1Q922J3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm9630-201ENSMUST00000178304 885 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm9540-201ENSMUST00000188230 478 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm17831-201ENSMUST00000205579 900 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm45219-201ENSMUST00000205602 465 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm45398-201ENSMUST00000210561 165 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC19.16■□□□□ 0.66
Clip1Q922J3 AC159103.1-201ENSMUST00000228325 429 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm8038-201ENSMUST00000164674 2044 ntBASIC19.16■□□□□ 0.66
Clip1Q922J3 Gm37513-201ENSMUST00000194830 2268 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms