Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gm19184-201ENSMUST00000196798 928 ntBASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh18Q8VHR0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Gm12091-201ENSMUST00000146791 830 ntBASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Gm27701-201ENSMUST00000184498 110 ntBASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh18Q8VHR0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm28911-201ENSMUST00000188837 117 ntBASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm2495-201ENSMUST00000191160 466 ntBASIC11.91□□□□□ -0.5
Pcdh18Q8VHR0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms