Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Snord83b-201ENSMUST00000104546 94 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm13612-201ENSMUST00000119276 390 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Rmrp-201ENSMUST00000157463 271 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm8463-201ENSMUST00000208573 613 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nudcd3Q8R1N4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Proscos-202ENSMUST00000178990 666 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm8598-201ENSMUST00000221184 836 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nudcd3Q8R1N4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nudcd3Q8R1N4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.29□□□□□ -0.44
Nudcd3Q8R1N4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nudcd3Q8R1N4 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.29□□□□□ -0.44
Nudcd3Q8R1N4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nudcd3Q8R1N4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nudcd3Q8R1N4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nudcd3Q8R1N4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms