Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sox30Q8CGW4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm5706-201ENSMUST00000181525 993 ntBASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm6222-202ENSMUST00000182143 629 ntBASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gm8420-201ENSMUST00000097103 598 ntBASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox30Q8CGW4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Gm7809-201ENSMUST00000153199 742 ntBASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox30Q8CGW4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox30Q8CGW4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms