Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim9Q8C7M3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim9Q8C7M3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Gm7399-201ENSMUST00000032395 858 ntBASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim9Q8C7M3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Gm6621-201ENSMUST00000193251 772 ntBASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.55□□□□□ -0.24
Trim9Q8C7M3 Gm19994-201ENSMUST00000217086 586 ntBASIC13.55□□□□□ -0.24
Trim9Q8C7M3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms