Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Gm17376-201ENSMUST00000166016 84 ntBASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Gm27046-201ENSMUST00000182160 463 ntBASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc60Q8C4J0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm14109-201ENSMUST00000118814 309 ntBASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm19994-201ENSMUST00000217086 586 ntBASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc60Q8C4J0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Gm4034-201ENSMUST00000187674 480 ntBASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc60Q8C4J0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc60Q8C4J0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms