Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf3Q8C120 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf3Q8C120 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf3Q8C120 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf3Q8C120 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf3Q8C120 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sh3rf3Q8C120 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm2546-201ENSMUST00000182630 991 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm42937-201ENSMUST00000197360 752 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm6007-201ENSMUST00000208170 823 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm10478-201ENSMUST00000084451 396 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh3rf3Q8C120 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Gm14999-201ENSMUST00000121039 624 ntBASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Gm23119-201ENSMUST00000158610 140 ntBASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Mospd4-201ENSMUST00000180618 576 ntBASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Gm10076-201ENSMUST00000073238 384 ntBASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sh3rf3Q8C120 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms