Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Gm45925-201ENSMUST00000218882 744 ntBASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Gm45930-201ENSMUST00000221330 292 ntBASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Zfp398Q8BV16 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gm4984-201ENSMUST00000115987 360 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gm9083-201ENSMUST00000120423 819 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gm6222-202ENSMUST00000182143 629 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Zfp398Q8BV16 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Zfp398Q8BV16 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms