Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Mir1247-201ENSMUST00000116706 82 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm24548-201ENSMUST00000158650 108 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm29396-201ENSMUST00000185659 716 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm8099-201ENSMUST00000200510 742 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm18935-201ENSMUST00000212692 664 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm8227-201ENSMUST00000223306 571 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cpsf4Q8BQZ5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cpsf4Q8BQZ5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm9630-201ENSMUST00000178304 885 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm6334-201ENSMUST00000207083 228 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm5781-201ENSMUST00000219792 443 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.95□□□□□ -0.5
Cpsf4Q8BQZ5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpsf4Q8BQZ5 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms