Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gm2756-201ENSMUST00000195851 400 ntBASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gm8396-201ENSMUST00000057361 823 ntBASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Smco3Q8BQM7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smco3Q8BQM7 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smco3Q8BQM7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smco3Q8BQM7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smco3Q8BQM7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Smco3Q8BQM7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.15□□□□□ -0.79
Smco3Q8BQM7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.15□□□□□ -0.79
Smco3Q8BQM7 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm11978-201ENSMUST00000122315 466 ntBASIC10.14□□□□□ -0.79
Smco3Q8BQM7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smco3Q8BQM7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms