Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc2Q6PDG5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm26956-201ENSMUST00000182176 986 ntBASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm42599-201ENSMUST00000201308 469 ntBASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcc2Q6PDG5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Gm11222-201ENSMUST00000119005 738 ntBASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Gm14381-201ENSMUST00000122105 414 ntBASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Gm21769-201ENSMUST00000211922 111 ntBASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcc2Q6PDG5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm13875-201ENSMUST00000120162 282 ntBASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Gm30285-201ENSMUST00000214614 422 ntBASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcc2Q6PDG5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcc2Q6PDG5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms