Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Gm16177-201ENSMUST00000120728 718 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Gm8018-201ENSMUST00000173536 789 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 Gm18584-201ENSMUST00000203098 964 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.38□□□□□ -0.91
Zfp248Q640N4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Zfp248Q640N4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.37□□□□□ -0.91
Zfp248Q640N4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.37□□□□□ -0.91
Zfp248Q640N4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.37□□□□□ -0.91
Zfp248Q640N4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.37□□□□□ -0.91
Zfp248Q640N4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.37□□□□□ -0.91
Zfp248Q640N4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.37□□□□□ -0.91
Zfp248Q640N4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.37□□□□□ -0.91
Zfp248Q640N4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Zfp248Q640N4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms