Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox17Q61473 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Sox17Q61473 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox17Q61473 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.52□□□□□ -0.56
Sox17Q61473 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox17Q61473 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox17Q61473 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox17Q61473 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.52□□□□□ -0.56
Sox17Q61473 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sox17Q61473 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sox17Q61473 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox17Q61473 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Sox17Q61473 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.52□□□□□ -0.56
Sox17Q61473 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox17Q61473 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sox17Q61473 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Sox17Q61473 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.52□□□□□ -0.57
Sox17Q61473 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.52□□□□□ -0.57
Sox17Q61473 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Sox17Q61473 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.52□□□□□ -0.57
Sox17Q61473 Gm28631-201ENSMUST00000190740 334 ntBASIC11.52□□□□□ -0.57
Sox17Q61473 Gm8099-201ENSMUST00000200510 742 ntBASIC11.52□□□□□ -0.57
Sox17Q61473 Gm44855-201ENSMUST00000205725 362 ntBASIC11.52□□□□□ -0.57
Sox17Q61473 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.52□□□□□ -0.57
Sox17Q61473 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.52□□□□□ -0.57
Sox17Q61473 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Gm5867-201ENSMUST00000063197 592 ntBASIC11.52□□□□□ -0.57
Sox17Q61473 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox17Q61473 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox17Q61473 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox17Q61473 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox17Q61473 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox17Q61473 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox17Q61473 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox17Q61473 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox17Q61473 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox17Q61473 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sox17Q61473 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.51□□□□□ -0.57
Sox17Q61473 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox17Q61473 Gm12928-201ENSMUST00000117115 573 ntBASIC11.51□□□□□ -0.57
Sox17Q61473 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.51□□□□□ -0.57
Sox17Q61473 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.51□□□□□ -0.57
Sox17Q61473 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sox17Q61473 Proscos-202ENSMUST00000178990 666 ntBASIC11.51□□□□□ -0.57
Sox17Q61473 Gm9022-201ENSMUST00000182482 992 ntBASIC11.51□□□□□ -0.57
Sox17Q61473 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox17Q61473 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.51□□□□□ -0.57
Sox17Q61473 Gm37042-201ENSMUST00000193816 581 ntBASIC11.51□□□□□ -0.57
Sox17Q61473 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox17Q61473 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 150.9 ms