Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Rmrp-201ENSMUST00000157463 271 ntBASIC11.76□□□□□ -0.53
Nr1h4Q60641 Gm27437-201ENSMUST00000183429 107 ntBASIC11.76□□□□□ -0.53
Nr1h4Q60641 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.76□□□□□ -0.53
Nr1h4Q60641 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Gm18018-201ENSMUST00000198273 408 ntBASIC11.76□□□□□ -0.53
Nr1h4Q60641 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.76□□□□□ -0.53
Nr1h4Q60641 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.76□□□□□ -0.53
Nr1h4Q60641 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.76□□□□□ -0.53
Nr1h4Q60641 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Nr1h4Q60641 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nr1h4Q60641 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.76□□□□□ -0.53
Nr1h4Q60641 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.76□□□□□ -0.53
Nr1h4Q60641 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.75□□□□□ -0.53
Nr1h4Q60641 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.75□□□□□ -0.53
Nr1h4Q60641 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Gm24136-201ENSMUST00000083374 165 ntBASIC11.75□□□□□ -0.53
Nr1h4Q60641 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.75□□□□□ -0.53
Nr1h4Q60641 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.75□□□□□ -0.53
Nr1h4Q60641 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.75□□□□□ -0.53
Nr1h4Q60641 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nr1h4Q60641 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.75□□□□□ -0.53
Nr1h4Q60641 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.75□□□□□ -0.53
Nr1h4Q60641 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms