Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3bQ3ULL6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Gm31256-201ENSMUST00000194705 506 ntBASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Gm38341-201ENSMUST00000195357 515 ntBASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upf3bQ3ULL6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Gm14832-201ENSMUST00000121289 322 ntBASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Gm43758-201ENSMUST00000199500 367 ntBASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3bQ3ULL6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Gm23270-201ENSMUST00000104055 131 ntBASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Gm15547-201ENSMUST00000122152 333 ntBASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Gm24845-201ENSMUST00000158034 109 ntBASIC13.18□□□□□ -0.3
Upf3bQ3ULL6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms