Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 AY036118-201ENSMUST00000200021 923 ntBASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Gm19187-201ENSMUST00000206781 892 ntBASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Palb2Q3U0P1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm12291-201ENSMUST00000121627 311 ntBASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm5369-201ENSMUST00000217499 588 ntBASIC13.81□□□□□ -0.2
Palb2Q3U0P1 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Mir339-201ENSMUST00000083659 96 ntBASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Palb2Q3U0P1 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm15515-201ENSMUST00000117827 822 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm9540-201ENSMUST00000188230 478 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm10752-201ENSMUST00000218348 729 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Palb2Q3U0P1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms