Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col17a1Q07563 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 AC093022.4-203ENSMUST00000228523 2657 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm11473-201ENSMUST00000118980 359 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm15197-201ENSMUST00000120526 478 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm14113-201ENSMUST00000121399 976 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC18.5■□□□□ 0.55
Col17a1Q07563 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Ighv5-8-202ENSMUST00000191967 337 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm42687-201ENSMUST00000199075 164 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Gm40332-201ENSMUST00000199847 938 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC18.5■□□□□ 0.55
Col17a1Q07563 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.5■□□□□ 0.55
Col17a1Q07563 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col17a1Q07563 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.5■□□□□ 0.55
Col17a1Q07563 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col17a1Q07563 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col17a1Q07563 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col17a1Q07563 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Col17a1Q07563 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC18.49■□□□□ 0.55
Col17a1Q07563 Gm27444-201ENSMUST00000184157 137 ntBASIC18.49■□□□□ 0.55
Col17a1Q07563 Gm44908-201ENSMUST00000208610 266 ntBASIC18.49■□□□□ 0.55
Col17a1Q07563 AC134913.2-201ENSMUST00000225017 771 ntBASIC18.49■□□□□ 0.55
Col17a1Q07563 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col17a1Q07563 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col17a1Q07563 Gm6478-201ENSMUST00000099450 742 ntBASIC18.49■□□□□ 0.55
Col17a1Q07563 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Col17a1Q07563 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col17a1Q07563 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Col17a1Q07563 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC18.48■□□□□ 0.55
Col17a1Q07563 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC18.48■□□□□ 0.55
Col17a1Q07563 Gm16547-201ENSMUST00000159474 293 ntBASIC18.48■□□□□ 0.55
Col17a1Q07563 Gm18391-201ENSMUST00000217189 658 ntBASIC18.48■□□□□ 0.55
Col17a1Q07563 Gm18042-201ENSMUST00000219887 790 ntBASIC18.48■□□□□ 0.55
Col17a1Q07563 Gm10371-202ENSMUST00000228010 1081 ntBASIC18.48■□□□□ 0.55
Col17a1Q07563 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Col17a1Q07563 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC18.48■□□□□ 0.55
Col17a1Q07563 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Gm8798-201ENSMUST00000211877 1661 ntBASIC18.48■□□□□ 0.55
Col17a1Q07563 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col17a1Q07563 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC18.47■□□□□ 0.55
Col17a1Q07563 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm23912-201ENSMUST00000104687 87 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm13422-201ENSMUST00000118834 504 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm15636-201ENSMUST00000119205 668 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC18.47■□□□□ 0.55
Col17a1Q07563 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm42689-201ENSMUST00000202403 404 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col17a1Q07563 Gm18001-201ENSMUST00000212023 688 ntBASIC18.47■□□□□ 0.55
Col17a1Q07563 AC154433.1-201ENSMUST00000224401 1183 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms